Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810950.1_cds_XP_016496468.1_10687
CDS Infomation

[gene=LOC107815409] [db_xref=GeneID:107815409] [protein=protein CHROMATIN REMODELING 35-like isoform X2] [exception=annotated by transcript or proteomic data] [protein_id=XP_016496468.1] [location=join(5855,5974..6042,7102..7688,10032..10223,12741..12899,13481..>14837)] [gbkey=CDS]
Sequence

ATGGCAATGGACTTAGGGAGCAGATTTGTTAACCCTACGGCTAAAAGGTTACAGCCCTGT
AGCCCCCGAGATTTATTTTCTAAGGGAACAAAAAAGATAAAATTTGATGAAAGTGGAAGC
CAGAGTAACCCTACTGTTGCATATAGCTGGCGGGAAGAATGCGAACACGAAAAAGGAAAG
GTGTCATCAGGAGTTTTTGGCCGCTCTGATCCGTTTGCTATTCCGGACTTGCTTGAAGCG
TTAGATTCTGGGAAGTTTGGAAGTGTCACCAGAGAGATTGAGGACCTTATTAAGCGGCGA
ATGAAGTTAGTGAACTCTTGTTTTGCAAGTGATCATTCACTTCCCAACAAAGTCTTGGAA
TTAGAAAGGAACTTTGAGAAAGGGGAGTTAAAAGGAAATCAGCTTGCGCCCGATGTAATT
GACTTGGAGGACGAGCAGGAAGCTAAAGGCATTGCTTCAGCAGCAATGGTTCCCTCTACA
TGTTTTGGACCTTCAGTTGGGCCTGTTGTTATTATTGATTCAGATGATGAAGACAGTCAA
AAAAACTTCATCTCTCCATCTCAGGGGATGATTCACACTCAGAAGAGTTCTATTTCTCCA
TTTCAGGGGATCCCCTTACAGAATGCTTTGATTGACTTTCAAGTTAAGGATTTTGTGGGG
AGGGATTCTGCTGAAAGACAGACTTTGATAGAAGTTGTAAGCCTCGGTGGAGAAGCTGAA
ATAAAGAAAGATAAAGGTGTTTATGTTGGTGTACAAGATGATGATGAGATTGATGATGGC
ACCGAGCAGCCCGATGAAGGTTTGACTGATATATGGAATGAGATGTCATTTGCTCTCGAA
TGCTCAAAGGATGTTGCTGCTGAACCTTCACCAAATGAGCATACAGTTGAAGAGGAAGAC
GAGTGTGATCATTCCTTCATCTTGAAAGATGATATTGGTTATGTCTGTCGTATATGCGGA
GTCATTCAGAGAAGCATTGATACCATCATTGAATTCCAGTATTCAAAGGCCTCCAAGAGT
ATAAGAACGTACCACTATGAAGGTCGGTCAGCCAAGGATATAGGGCATGCTGAACTCCTT
CCTGAGGGCATCATTTCATCTGATGACATTGATACGACTGAAATTTGTGTTCATCCAAGA
CACAAGAAACTGATGAAAGCTCACCAAGTTGAGGGATTTAATTTTCTTGTTAGCAACTTG
TTGAAAGATAAAGGAGGCTGTATCATGGCTCACGCCCCTGGATCTGGCAAGACTTTCATG
ATAATCAGCTTCCTACAGAGTTTTATGGCCAATAATGATAGAGCTAGGCCTTTGGTGGTG
TTACCTAGAGGAATCTTGGCTACATGGAAGAAAGAGTTCTTGAGGTGGCAGGTAGATGAA
ATTCCCCTCTATGACTTCTACTCAGTAAAAGCAGATAATAGATCTCAACAATTGGAAGTT
CTGAAGCAATGGTCACAGGAAAGAAGTATTCTTTTTCTAGGCTATAAGCAGTTCTCAACA
ATCGTGTGTGACAATGTTGGCAGTACGACTGCAGCTGCTTGTCAGGAGATTCTGTTGAAG
TGCCCATCAATTCTCATTCTTGATGAAGGGCACACTCCGCGGAACCAAGACACTGATGTT
TTGACTTCACTCGAGAAGGTCCAGACGCGACTAAAGGTGGTGCTTTCTGGCACCCTCTAC
CAAAACCATGTTAAAGAGGTCTTTAACATTCTGAACCTTGTGCGGCCAAAATTTCTCAAG
TTGGAAGATTCCAGAAACATCAAAAGGACAATACTGAGCAAAGTGGCCAGCTCAGGCAGA
AAGAACCTCTTGAAGAAAAGTAATGATAATGATTTTTATGAGTTAGTAGAGCATACATTG
TTAAAGGATGACAATTTCTCAAGGAAGAGTTCTGTCATACTAGGTCTGCGGGATATGACC
AGTAAAGTGCTTCACTATTACAAGGGAGACTTCCTCGAAGAACTTCCAGGATTGGTGGAT
TACACTGTCCTTCTAAACCTCCATCCTAAGCAGAAAAGTGAAGTTGCAGAGCTGAAGAAA
CTGGGAAGAAAGTTCAAAATCAGTTCTGAAGGAAGTGCAATGTATGTGCACCCACAATTG
AAGAGCCTTTCAAGAAACTTTTCTGTTAAAGAAAGAGTTGATGAAGAGAAGATTGATATG
CTCTTAGAGAATTTGGAAGTGAGGGAAGGAGTGAAGGCCAAATTCTACCTTAACCTGCTG
CAGCTGTGTGAATCAAAAGGTGAAAAACTGCTAGTGTTTAGCCAGTACCTCTTGCCTTTG
AAATTCTTGGAGAGGTTGACTGTTAGGACTAAGGGTTACAGTCTGGGGAAGGAAATATTT
CTGATCACTGGTGATTCAGACTCGG

Peptide Sequence

PEP ID

XP_016496468.1
PEP Infomation

PREDICTED: protein CHROMATIN REMODELING 35-like isoform X2 [Nicotiana tabacum]
Sequence

MAMDLGSRFVNPTAKRLQPCSPRDLFSKGTKKIKFDESGSQSNPTVAYSWREECEHEKGK
VSSGVFGRSDPFAIPDLLEALDSGKFGSVTREIEDLIKRRMKLVNSCFASDHSLPNKVLE
LERNFEKGELKGNQLAPDVIDLEDEQEAKGIASAAMVPSTCFGPSVGPVVIIDSDDEDSQ
KNFISPSQGMIHTQKSSISPFQGIPLQNALIDFQVKDFVGRDSAERQTLIEVVSLGGEAE
IKKDKGVYVGVQDDDEIDDGTEQPDEGLTDIWNEMSFALECSKDVAAEPSPNEHTVEEED
ECDHSFILKDDIGYVCRICGVIQRSIDTIIEFQYSKASKSIRTYHYEGRSAKDIGHAELL
PEGIISSDDIDTTEICVHPRHKKLMKAHQVEGFNFLVSNLLKDKGGCIMAHAPGSGKTFM
IISFLQSFMANNDRARPLVVLPRGILATWKKEFLRWQVDEIPLYDFYSVKADNRSQQLEV
LKQWSQERSILFLGYKQFSTIVCDNVGSTTAAACQEILLKCPSILILDEGHTPRNQDTDV
LTSLEKVQTRLKVVLSGTLYQNHVKEVFNILNLVRPKFLKLEDSRNIKRTILSKVASSGR
KNLLKKSNDNDFYELVEHTLLKDDNFSRKSSVILGLRDMTSKVLHYYKGDFLEELPGLVD
YTVLLNLHPKQKSEVAELKKLGRKFKISSEGSAMYVHPQLKSLSRNFSVKERVDEEKIDM
LLENLEVREGVKAKFYLNLLQLCESKGEKLLVFSQYLLPLKFLERLTVRTKGYSLGKEIF
LITGDSDSETRESSMERFNTSADARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQ
AIGRAFRPGQVRKVYTYRLIASGSPEEEDHQTCFKKESIAKLWFEWSEYYAQPDFEMETV
NIENCDDMFLESPRLNEDVVALYKR

Transcript Sequence

Gene sequence data has not been registered.